IL_4V6P_211
3D structure
- PDB id
- 4V6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- GGG*UCC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6P_211 not in the Motif Atlas
- Geometric match to IL_4V88_406
- Geometric discrepancy: 0.2439
- The information below is about IL_4V88_406
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_76004.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V6P|1|BB|G|2524
4V6P|1|BB|G|2525
4V6P|1|BB|G|2526
*
4V6P|1|BB|U|2537
4V6P|1|BB|C|2538
4V6P|1|BB|C|2539
Current chains
- Chain BB
- 23S ribomosomal RNA
Nearby chains
- Chain B7
- 50S ribosomal protein L36
- Chain BH
- 50S ribosomal protein L6
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