IL_4V6Q_040
3D structure
- PDB id
- 4V6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 11.5 Å
Loop
- Sequence
- GUU*GGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6Q_040 not in the Motif Atlas
- Geometric match to IL_2ZNI_001
- Geometric discrepancy: 0.3115
- The information below is about IL_2ZNI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
4V6Q|1|AA|G|833
4V6Q|1|AA|U|834
4V6Q|1|AA|U|835
*
4V6Q|1|AA|G|851
4V6Q|1|AA|G|852
4V6Q|1|AA|C|853
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AE
- 30S ribosomal protein S2
- Chain AU
- 30S ribosomal protein S18
- Chain AX
- 30S ribosomal protein S21
Coloring options: