IL_4V6S_100
3D structure
- PDB id
- 4V6S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.1 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- 4V6S|1|AB|A|2726
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6S_100 not in the Motif Atlas
- Homologous match to IL_7RQB_104
- Geometric discrepancy: 0.3428
- The information below is about IL_7RQB_104
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.6
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 14
Unit IDs
4V6S|1|AB|U|2680
4V6S|1|AB|C|2681
4V6S|1|AB|A|2682
4V6S|1|AB|C|2683
4V6S|1|AB|U|2684
*
4V6S|1|AB|A|2725
4V6S|1|AB|A|2726
4V6S|1|AB|A|2727
Current chains
- Chain AB
- 23S ribomosomal RNA
Nearby chains
- Chain AE
- 50S ribosomal protein L3
- Chain AM
- 50S ribosomal protein L14
- Chain AP
- 50S ribosomal protein L17
- Chain AR
- 50S ribosomal protein L19
Coloring options: