IL_4V6T_152
3D structure
- PDB id
- 4V6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.3 Å
Loop
- Sequence
- CCUU*AAUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6T_152 not in the Motif Atlas
- Homologous match to IL_5J7L_327
- Geometric discrepancy: 0.3744
- The information below is about IL_5J7L_327
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_43644.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V6T|1|BA|C|2103
4V6T|1|BA|C|2104
4V6T|1|BA|U|2105
4V6T|1|BA|U|2106
*
4V6T|1|BA|A|2183
4V6T|1|BA|A|2184
4V6T|1|BA|U|2185
4V6T|1|BA|G|2186
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: