IL_4V6V_085
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6V_085 not in the Motif Atlas
- Homologous match to IL_7RQB_021
- Geometric discrepancy: 0.2531
- The information below is about IL_7RQB_021
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_56467.8
- Basepair signature
- cWW-tSH-tSH-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
4V6V|1|BA|U|703
4V6V|1|BA|G|704
4V6V|1|BA|A|705
4V6V|1|BA|A|706
4V6V|1|BA|G|707
*
4V6V|1|BA|U|724
4V6V|1|BA|G|725
4V6V|1|BA|G|726
4V6V|1|BA|A|727
4V6V|1|BA|G|728
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BD
- 50S ribosomal protein L2
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