IL_4V6V_167
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- CUGAG*CGAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 4V6V|1|BA|G|2780
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6V_167 not in the Motif Atlas
- Homologous match to IL_4WF9_099
- Geometric discrepancy: 0.1292
- The information below is about IL_4WF9_099
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.3
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4V6V|1|BA|C|2636
4V6V|1|BA|U|2637
4V6V|1|BA|G|2638
4V6V|1|BA|A|2639
4V6V|1|BA|G|2640
*
4V6V|1|BA|C|2774
4V6V|1|BA|G|2775
4V6V|1|BA|A|2776
4V6V|1|BA|G|2777
4V6V|1|BA|A|2778
4V6V|1|BA|U|2779
4V6V|1|BA|G|2780
4V6V|1|BA|A|2781
4V6V|1|BA|G|2782
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BN
- 50S ribosomal protein L13
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