IL_4V6X_167
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CA*UCG
- Length
- 5 nucleotides
- Bulged bases
- 4V6X|1|A7|C|63
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_167 not in the Motif Atlas
- Homologous match to IL_5TBW_372
- Geometric discrepancy: 0.4414
- The information below is about IL_5TBW_372
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
4V6X|1|A7|C|15
4V6X|1|A7|A|16
*
4V6X|1|A7|U|62
4V6X|1|A7|C|63
4V6X|1|A7|G|64
Current chains
- Chain A7
- 5S ribosomal RNA
Nearby chains
- Chain A5
- Large subunit ribosomal RNA; LSU rRNA
- Chain CD
- 60S ribosomal protein L5
- Chain CI
- 60S ribosomal protein L10-like
- Chain CJ
- 60S ribosomal protein L11
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