IL_4V6X_245
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 4V6X|1|B2|A|1489
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_245 not in the Motif Atlas
- Homologous match to IL_4V88_452
- Geometric discrepancy: 0.1913
- The information below is about IL_4V88_452
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
4V6X|1|B2|C|1337
4V6X|1|B2|G|1338
*
4V6X|1|B2|C|1488
4V6X|1|B2|A|1489
4V6X|1|B2|G|1490
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AC
- 40S ribosomal protein S2
- Chain AD
- 40S ribosomal protein S3
- Chain AU
- 40S ribosomal protein S20
- Chain Ad
- 40S ribosomal protein S29
- Chain Ah
- Plasminogen activator inhibitor 1 RNA-binding protein
- Chain Az
- Elongation factor 2
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