IL_4V6X_255
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- ACUGG*CCAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_255 not in the Motif Atlas
- Geometric match to IL_4V88_422
- Geometric discrepancy: 0.3214
- The information below is about IL_4V88_422
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V6X|1|B2|A|1537
4V6X|1|B2|C|1538
4V6X|1|B2|U|1539
4V6X|1|B2|G|1540
4V6X|1|B2|G|1541
*
4V6X|1|B2|C|1592
4V6X|1|B2|C|1593
4V6X|1|B2|A|1594
4V6X|1|B2|U|1595
4V6X|1|B2|U|1596
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AF
- 40S ribosomal protein S5
- Chain AQ
- 40S ribosomal protein S16
- Chain AS
- 40S ribosomal protein S18
- Chain AT
- 40S ribosomal protein S19
- Chain AZ
- 40S ribosomal protein S25
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