IL_4V6X_273

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

CGAAU*ACAUGUG

Length

12 nucleotides

Bulged bases

4V6X|1|A5|G|119, 4V6X|1|A5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|C|118
4V6X|1|A5|G|119
4V6X|1|A5|A|120
4V6X|1|A5|A|121
4V6X|1|A5|U|122
*
4V6X|1|A5|A|147
4V6X|1|A5|C|148
4V6X|1|A5|A|149
4V6X|1|A5|U|150
4V6X|1|A5|G|151
4V6X|1|A5|U|152
4V6X|1|A5|G|153

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain A8

5.8S ribosomal RNA; 5.8S rRNA

Chain CG

60S ribosomal protein L7a

Chain CN

60S ribosomal protein L15

Chain Ch

60S ribosomal protein L35