IL_4V6X_283
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- UCGC*GGA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_283 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.382
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V6X|1|A5|U|1473
4V6X|1|A5|C|1474
4V6X|1|A5|G|1475
4V6X|1|A5|C|1476
*
4V6X|1|A5|G|1489
4V6X|1|A5|G|1490
4V6X|1|A5|A|1491
Current chains
- Chain A5
- 28S ribosomal RNA
Nearby chains
- Chain CL
- 60S ribosomal protein L13
- Chain Ca
- 60S ribosomal protein L27a
- Chain Cb
- 60S ribosomal protein L29
- Chain Co
- 60S ribosomal protein L36a
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