IL_4V6X_316
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CUG*CUAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_316 not in the Motif Atlas
- Homologous match to IL_8GLP_064
- Geometric discrepancy: 0.1858
- The information below is about IL_8GLP_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16315.2
- Basepair signature
- cWW-cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V6X|1|A5|C|1686
4V6X|1|A5|U|1687
4V6X|1|A5|G|1688
*
4V6X|1|A5|C|1848
4V6X|1|A5|U|1849
4V6X|1|A5|A|1850
4V6X|1|A5|G|1851
Current chains
- Chain A5
- 28S ribosomal RNA
Nearby chains
- Chain CL
- 60S ribosomal protein L13
- Chain CQ
- 60S ribosomal protein L18
- Chain CT
- 60S ribosomal protein L21
- Chain Ca
- 60S ribosomal protein L27a
- Chain Cb
- 60S ribosomal protein L29
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