IL_4V6Y_088
3D structure
- PDB id
- 4V6Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 4V6Y|1|BA|A|788, 4V6Y|1|BA|A|789
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6Y_088 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.1432
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V6Y|1|BA|G|775
4V6Y|1|BA|G|776
4V6Y|1|BA|G|777
*
4V6Y|1|BA|C|787
4V6Y|1|BA|A|788
4V6Y|1|BA|A|789
4V6Y|1|BA|U|790
4V6Y|1|BA|C|791
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 50S ribosomal protein L32
- Chain BC
- 50S ribosomal protein L35
- Chain BE
- 50S ribosomal protein L2
- Chain BS
- 50S ribosomal protein L20
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