IL_4V6Y_142

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GUGA*UCC

Length

7 nucleotides

Bulged bases

4V6Y|1|BA|U|2068

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Y_142 not in the Motif Atlas

Geometric match to IL_1NBS_006

Geometric discrepancy: 0.2956

The information below is about IL_1NBS_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V6Y|1|BA|G|2067
4V6Y|1|BA|U|2068
4V6Y|1|BA|G|2069
4V6Y|1|BA|A|2070
*
4V6Y|1|BA|U|2441
4V6Y|1|BA|C|2442
4V6Y|1|BA|C|2443

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L2

Chain BL

50S ribosomal protein L13