IL_4V6Z_042
3D structure
- PDB id
- 4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12 Å
Loop
- Sequence
- GCA*UUCCC
- Length
- 8 nucleotides
- Bulged bases
- 4V6Z|1|AA|C|934, 4V6Z|1|AA|U|1381
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6Z_042 not in the Motif Atlas
- Homologous match to IL_5J7L_041
- Geometric discrepancy: 0.3519
- The information below is about IL_5J7L_041
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.2
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
4V6Z|1|AA|G|933
4V6Z|1|AA|C|934
4V6Z|1|AA|A|935
*
4V6Z|1|AA|U|1380
4V6Z|1|AA|U|1381
4V6Z|1|AA|C|1382
4V6Z|1|AA|C|1383
4V6Z|1|AA|C|1384
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain A3
- Transfer RNA; tRNA
- Chain AG
- 30S ribosomal protein S7
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