IL_4V6Z_114

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_114 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.5285

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

4V6Z|1|BA|C|1437
4V6Z|1|BA|U|1438
4V6Z|1|BA|A|1439
4V6Z|1|BA|U|1440
*
4V6Z|1|BA|A|1551
4V6Z|1|BA|A|1552
4V6Z|1|BA|A|1553
4V6Z|1|BA|U|1554
4V6Z|1|BA|G|1555

Current chains

Chain BA

23S ribosomal RNA

Nearby chains