IL_4V70_056

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4V70|1|AA|C|1400, 4V70|1|AA|A|1503

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_056 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.2985

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

4V70|1|AA|C|1399
4V70|1|AA|C|1400
4V70|1|AA|G|1401
*
4V70|1|AA|C|1501
4V70|1|AA|A|1502
4V70|1|AA|A|1503
4V70|1|AA|G|1504

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain A2

5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'