IL_4V70_075

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

4V70|1|BA|A|504, 4V70|1|BA|A|508

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_075 not in the Motif Atlas

Homologous match to IL_4WF9_015

Geometric discrepancy: 0.2806

The information below is about IL_4WF9_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44923.1

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

9

Unit IDs

4V70|1|BA|G|481
4V70|1|BA|A|482
4V70|1|BA|A|483
4V70|1|BA|C|484
*
4V70|1|BA|G|496
4V70|1|BA|A|497
4V70|1|BA|G|498
4V70|1|BA|U|499
4V70|1|BA|G|500
4V70|1|BA|A|501
4V70|1|BA|A|502
4V70|1|BA|A|503
4V70|1|BA|A|504
4V70|1|BA|A|505
4V70|1|BA|G|506
4V70|1|BA|A|507
4V70|1|BA|A|508
4V70|1|BA|C|509

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BS

50S ribosomal protein L22

Chain BU

50S ribosomal protein L24