IL_4V70_143

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUGUAGGAUAG*CC

Length

13 nucleotides

Bulged bases

4V70|1|BA|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_143 not in the Motif Atlas

Homologous match to IL_3U4M_002

Geometric discrepancy: 0.5929

The information below is about IL_3U4M_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32056.1

Basepair signature

cWW-L-cWW-L-L-tWH-R-L-R-L

Number of instances in this motif group

3

Unit IDs

4V70|1|BA|G|2110
4V70|1|BA|U|2111
4V70|1|BA|G|2112
4V70|1|BA|U|2113
4V70|1|BA|A|2114
4V70|1|BA|G|2115
4V70|1|BA|G|2116
4V70|1|BA|A|2117
4V70|1|BA|U|2118
4V70|1|BA|A|2119
4V70|1|BA|G|2120
*
4V70|1|BA|C|2178
4V70|1|BA|C|2179

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A3

Transfer RNA; tRNA

Chain AG

30S ribosomal protein S7

Chain B5

50S ribosomal protein L1