IL_4V71_182
3D structure
- PDB id
- 4V71 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 20 Å
Loop
- Sequence
- GGGAACUG*CUAAGUACC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V71_182 not in the Motif Atlas
- Homologous match to IL_4WF9_008
- Geometric discrepancy: 0.3593
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93502.1
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V71|1|BA|G|187
4V71|1|BA|G|188
4V71|1|BA|G|189
4V71|1|BA|A|190
4V71|1|BA|A|191
4V71|1|BA|C|192
4V71|1|BA|U|193
4V71|1|BA|G|194
*
4V71|1|BA|C|201
4V71|1|BA|U|202
4V71|1|BA|A|203
4V71|1|BA|A|204
4V71|1|BA|G|205
4V71|1|BA|U|206
4V71|1|BA|A|207
4V71|1|BA|C|208
4V71|1|BA|C|209
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 50S ribosomal protein L34
- Chain B3
- 50S ribosomal protein L35
- Chain BL
- 50S ribosomal protein L15
- Chain BX
- 50S ribosomal protein L28
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