3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
GC*GCAC
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V72_138 not in the Motif Atlas
Homologous match to IL_4WF9_076
Geometric discrepancy: 0.324
The information below is about IL_4WF9_076
Detailed Annotation
Bulged stacked bases
Broad Annotation
No text annotation
Motif group
IL_22551.4
Basepair signature
cWW-L-cWW-L
Number of instances in this motif group
9

Unit IDs

4V72|1|BA|G|1933
4V72|1|BA|C|1934
*
4V72|1|BA|G|1964
4V72|1|BA|C|1965
4V72|1|BA|A|1966
4V72|1|BA|C|1967

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA

Coloring options:


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