IL_4V72_143

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

AA*UACU

Length

6 nucleotides

Bulged bases

4V72|1|BA|A|2439

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V72_143 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.1805

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

4V72|1|BA|A|2070
4V72|1|BA|A|2071
*
4V72|1|BA|U|2438
4V72|1|BA|A|2439
4V72|1|BA|C|2440
4V72|1|BA|U|2441

Current chains

Chain BA

23S ribosomal RNA

Nearby chains