IL_4V72_189
3D structure
- PDB id
- 4V72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13 Å
Loop
- Sequence
- AUAAGUAAC*GUGAAAUU
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V72_189 not in the Motif Atlas
- Geometric match to IL_4WF9_008
- Geometric discrepancy: 0.3312
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_84694.2
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V72|1|BA|A|1262
4V72|1|BA|U|1263
4V72|1|BA|A|1264
4V72|1|BA|A|1265
4V72|1|BA|G|1266
4V72|1|BA|U|1267
4V72|1|BA|A|1268
4V72|1|BA|A|1269
4V72|1|BA|C|1270
*
4V72|1|BA|G|2010
4V72|1|BA|U|2011
4V72|1|BA|G|2012
4V72|1|BA|A|2013
4V72|1|BA|A|2014
4V72|1|BA|A|2015
4V72|1|BA|U|2016
4V72|1|BA|U|2017
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B0
- 50S ribosomal protein L32
- Chain BN
- 50S ribosomal protein L17
- Chain BQ
- 50S ribosomal protein L20
- Chain BS
- 50S ribosomal protein L22
Coloring options: