IL_4V73_005

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UCGAA*UGG

Length

8 nucleotides

Bulged bases

4V73|1|AA|G|64, 4V73|1|AA|A|65

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V73_005 not in the Motif Atlas

Geometric match to IL_5J7L_008

Geometric discrepancy: 0.3983

The information below is about IL_5J7L_008

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_43275.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

4V73|1|AA|U|62
4V73|1|AA|C|63
4V73|1|AA|G|64
4V73|1|AA|A|65
4V73|1|AA|A|66
*
4V73|1|AA|U|103
4V73|1|AA|G|104
4V73|1|AA|G|105

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20