IL_4V73_015

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

4V73|1|AA|C|307

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V73_015 not in the Motif Atlas

Homologous match to IL_5J7L_016

Geometric discrepancy: 0.5658

The information below is about IL_5J7L_016

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

4V73|1|AA|G|292
4V73|1|AA|G|293
*
4V73|1|AA|U|304
4V73|1|AA|G|305
4V73|1|AA|A|306
4V73|1|AA|C|307
4V73|1|AA|C|308

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16