3D structure

PDB id
4V73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
GUUGC*GAACUC
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V73_052 not in the Motif Atlas
Homologous match to IL_5J7L_051
Geometric discrepancy: 0.3704
The information below is about IL_5J7L_051
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_06691.1
Basepair signature
cWW-cWS-L-R-L-R-cWW-L
Number of instances in this motif group
2

Unit IDs

4V73|1|AA|G|1124
4V73|1|AA|U|1125
4V73|1|AA|U|1126
4V73|1|AA|G|1127
4V73|1|AA|C|1128
*
4V73|1|AA|G|1144
4V73|1|AA|A|1145
4V73|1|AA|A|1146
4V73|1|AA|C|1147
4V73|1|AA|U|1148
4V73|1|AA|C|1149

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10

Coloring options:


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