3D structure

PDB id
4V73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
GGAG*CGACCUUGAAAUAC
Length
18 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V73_143 not in the Motif Atlas
Homologous match to IL_3U4M_003
Geometric discrepancy: 0.5576
The information below is about IL_3U4M_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_75283.2
Basepair signature
cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
Number of instances in this motif group
3

Unit IDs

4V73|1|BA|G|2124
4V73|1|BA|G|2125
4V73|1|BA|A|2126
4V73|1|BA|G|2127
*
4V73|1|BA|C|2161
4V73|1|BA|G|2162
4V73|1|BA|A|2163
4V73|1|BA|C|2164
4V73|1|BA|C|2165
4V73|1|BA|U|2166
4V73|1|BA|U|2167
4V73|1|BA|G|2168
4V73|1|BA|A|2169
4V73|1|BA|A|2170
4V73|1|BA|A|2171
4V73|1|BA|U|2172
4V73|1|BA|A|2173
4V73|1|BA|C|2174

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain A3
Transfer RNA; tRNA
Chain AG
30S ribosomal protein S7
Chain B5
50S ribosomal protein L1

Coloring options:


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