IL_4V74_037

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

4V74|1|AA|A|702

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_037 not in the Motif Atlas

Geometric match to IL_4V88_434

Geometric discrepancy: 0.3209

The information below is about IL_4V88_434

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_45067.5

Basepair signature

cWW-tSH-tSS-tHS-R-cWW-cWW-R

Number of instances in this motif group

16

Unit IDs

4V74|1|AA|U|684
4V74|1|AA|G|685
4V74|1|AA|U|686
4V74|1|AA|A|687
4V74|1|AA|G|688
*
4V74|1|AA|C|699
4V74|1|AA|G|700
4V74|1|AA|U|701
4V74|1|AA|A|702
4V74|1|AA|G|703
4V74|1|AA|A|704
4V74|1|AA|G|705
4V74|1|AA|A|706

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BC

50S ribosomal protein L2