IL_4V74_040

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GGAGUACGG*UUAAAAC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_040 not in the Motif Atlas

Homologous match to IL_6CZR_146

Geometric discrepancy: 0.3853

The information below is about IL_6CZR_146

Detailed Annotation

9x7 Sarcin-Ricin with inserted C; G-bulge

Broad Annotation

Sarcin-Ricin; G-bulge

Motif group

IL_68633.1

Basepair signature

cWW-L-R-L-R-cSH-tWH-tHS-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

4V74|1|AA|G|887
4V74|1|AA|G|888
4V74|1|AA|A|889
4V74|1|AA|G|890
4V74|1|AA|U|891
4V74|1|AA|A|892
4V74|1|AA|C|893
4V74|1|AA|G|894
4V74|1|AA|G|895
*
4V74|1|AA|U|904
4V74|1|AA|U|905
4V74|1|AA|A|906
4V74|1|AA|A|907
4V74|1|AA|A|908
4V74|1|AA|A|909
4V74|1|AA|C|910

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12