IL_4V74_087

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

4V74|1|BA|G|776, 4V74|1|BA|A|788, 4V74|1|BA|A|789, 4V74|1|BA|U|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_087 not in the Motif Atlas

Geometric match to IL_5J7L_265

Geometric discrepancy: 0.1045

The information below is about IL_5J7L_265

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

4V74|1|BA|G|775
4V74|1|BA|G|776
4V74|1|BA|G|777
*
4V74|1|BA|C|787
4V74|1|BA|A|788
4V74|1|BA|A|789
4V74|1|BA|U|790
4V74|1|BA|C|791

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BC

50S ribosomal protein L2

Chain BS

50S ribosomal protein L22