3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CGCAG*UCAGG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V75_027 not in the Motif Atlas
Homologous match to IL_6CZR_135
Geometric discrepancy: 0.5599
The information below is about IL_6CZR_135
Detailed Annotation
tSH-tHW-tHS
Broad Annotation
No text annotation
Motif group
IL_17136.6
Basepair signature
cWW-tSH-tHW-tHS-cWW
Number of instances in this motif group
16

Unit IDs

4V75|1|AA|C|580
4V75|1|AA|G|581
4V75|1|AA|C|582
4V75|1|AA|A|583
4V75|1|AA|G|584
*
4V75|1|AA|U|757
4V75|1|AA|C|758
4V75|1|AA|A|759
4V75|1|AA|G|760
4V75|1|AA|G|761

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AH
30S ribosomal protein S8
Chain AL
30S ribosomal protein S12
Chain AO
30S ribosomal protein S15
Chain AQ
30S ribosomal protein S17

Coloring options:


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