3D structure

PDB id
4V75 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
UUAAC*GGGAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V75_080 not in the Motif Atlas
Homologous match to IL_7RQB_016
Geometric discrepancy: 0.1329
The information below is about IL_7RQB_016
Detailed Annotation
AAA cross-strand stack
Broad Annotation
AAA cross-strand stack
Motif group
IL_17136.1
Basepair signature
cWW-tSH-tHW-tHS-cWW
Number of instances in this motif group
24

Unit IDs

4V75|1|BA|U|606
4V75|1|BA|U|607
4V75|1|BA|A|608
4V75|1|BA|A|609
4V75|1|BA|C|610
*
4V75|1|BA|G|618
4V75|1|BA|G|619
4V75|1|BA|G|620
4V75|1|BA|A|621
4V75|1|BA|G|622

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B3
50S ribosomal protein L35
Chain BE
50S ribosomal protein L4
Chain BL
50S ribosomal protein L15

Coloring options:


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