IL_4V75_084

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UUGAAG*UGGAGGA

Length

13 nucleotides

Bulged bases

4V75|1|BA|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V75_084 not in the Motif Atlas

Geometric match to IL_5LR3_002

Geometric discrepancy: 0.3216

The information below is about IL_5LR3_002

Detailed Annotation

Quadruple sheared

Broad Annotation

No text annotation

Motif group

IL_06136.2

Basepair signature

cWW-tHS-cWW-tHS-tSH-tSH-cWW

Number of instances in this motif group

6

Unit IDs

4V75|1|BA|U|702
4V75|1|BA|U|703
4V75|1|BA|G|704
4V75|1|BA|A|705
4V75|1|BA|A|706
4V75|1|BA|G|707
*
4V75|1|BA|U|724
4V75|1|BA|G|725
4V75|1|BA|G|726
4V75|1|BA|A|727
4V75|1|BA|G|728
4V75|1|BA|G|729
4V75|1|BA|A|730

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2