IL_4V75_116

3D structure

PDB id

4V75 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GAAG*CCUGC

Length

9 nucleotides

Bulged bases

4V75|1|BA|U|1559

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V75_116 not in the Motif Atlas

Homologous match to IL_5J7L_296

Geometric discrepancy: 0.5456

The information below is about IL_5J7L_296

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_58112.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

4V75|1|BA|G|1432
4V75|1|BA|A|1433
4V75|1|BA|A|1434
4V75|1|BA|G|1435
*
4V75|1|BA|C|1557
4V75|1|BA|C|1558
4V75|1|BA|U|1559
4V75|1|BA|G|1560
4V75|1|BA|C|1561

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L2