3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GGAUAAC*GCUAAUAC
Length
15 nucleotides
Bulged bases
4V76|1|AA|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V76_012 not in the Motif Atlas
Homologous match to IL_5J7L_012
Geometric discrepancy: 0.182
The information below is about IL_5J7L_012
Detailed Annotation
tWH-tWH-tHW-tHW
Broad Annotation
No text annotation
Motif group
IL_80604.6
Basepair signature
cWW-cWW-tWH-tWH-tHW-tHW-cWW
Number of instances in this motif group
3

Unit IDs

4V76|1|AA|G|147
4V76|1|AA|G|148
4V76|1|AA|A|149
4V76|1|AA|U|150
4V76|1|AA|A|151
4V76|1|AA|A|152
4V76|1|AA|C|153
*
4V76|1|AA|G|168
4V76|1|AA|C|169
4V76|1|AA|U|170
4V76|1|AA|A|171
4V76|1|AA|A|172
4V76|1|AA|U|173
4V76|1|AA|A|174
4V76|1|AA|C|175

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AT
30S ribosomal protein S20

Coloring options:


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