3D structure

PDB id
4V76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
CCCAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
4V76|1|BA|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V76_103 not in the Motif Atlas
Homologous match to IL_5J7L_284
Geometric discrepancy: 0.1946
The information below is about IL_5J7L_284
Detailed Annotation
Kink-turn
Broad Annotation
No text annotation
Motif group
IL_99692.2
Basepair signature
cWW-tSS-tSH-L-R-R-L-cWW-L-L
Number of instances in this motif group
6

Unit IDs

4V76|1|BA|C|1043
4V76|1|BA|C|1044
4V76|1|BA|C|1045
4V76|1|BA|A|1046
4V76|1|BA|G|1047
4V76|1|BA|A|1048
4V76|1|BA|C|1049
4V76|1|BA|A|1050
4V76|1|BA|G|1051
*
4V76|1|BA|U|1108
4V76|1|BA|C|1109
4V76|1|BA|G|1110
4V76|1|BA|A|1111
4V76|1|BA|G|1112

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain B4
50S ribosomal protein L36
Chain BG
50S ribosomal protein L6

Coloring options:


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