IL_4V77_056

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

4V77|1|AA|A|1257, 4V77|1|AA|A|1280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_056 not in the Motif Atlas

Homologous match to IL_4LFB_052

Geometric discrepancy: 0.254

The information below is about IL_4LFB_052

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

4V77|1|AA|G|1255
4V77|1|AA|A|1256
4V77|1|AA|A|1257
4V77|1|AA|G|1258
*
4V77|1|AA|C|1277
4V77|1|AA|G|1278
4V77|1|AA|G|1279
4V77|1|AA|A|1280
4V77|1|AA|C|1281
4V77|1|AA|C|1282

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14