IL_4V77_059

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

4V77|1|AA|C|1400, 4V77|1|AA|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_059 not in the Motif Atlas

Geometric match to IL_4V88_463

Geometric discrepancy: 0.3272

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

4V77|1|AA|C|1399
4V77|1|AA|C|1400
4V77|1|AA|G|1401
*
4V77|1|AA|C|1501
4V77|1|AA|A|1502
4V77|1|AA|A|1503
4V77|1|AA|G|1504

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain A2

5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'

Chain AK

30S ribosomal protein S11