IL_4V77_089

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CAUC*GAAUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_089 not in the Motif Atlas

Geometric match to IL_1J2B_001

Geometric discrepancy: 0.3893

The information below is about IL_1J2B_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68909.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

4V77|1|BA|C|848
4V77|1|BA|A|849
4V77|1|BA|U|850
4V77|1|BA|C|851
*
4V77|1|BA|G|926
4V77|1|BA|A|927
4V77|1|BA|A|928
4V77|1|BA|U|929
4V77|1|BA|G|930

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BZ

50S ribosomal protein L30