IL_4V77_117

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

4V77|1|BA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_117 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.5228

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V77|1|BA|C|1437
4V77|1|BA|U|1438
4V77|1|BA|A|1439
4V77|1|BA|U|1440
*
4V77|1|BA|A|1551
4V77|1|BA|A|1552
4V77|1|BA|A|1553
4V77|1|BA|U|1554
4V77|1|BA|G|1555

Current chains

Chain BA

23S ribosomal RNA

Nearby chains