IL_4V77_190

3D structure

PDB id

4V77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V77_190 not in the Motif Atlas

Geometric match to IL_1Y27_001

Geometric discrepancy: 0.2181

The information below is about IL_1Y27_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

214

Unit IDs

4V77|1|BB|C|8
4V77|1|BB|G|9
4V77|1|BB|G|10
*
4V77|1|BB|C|110
4V77|1|BB|U|111
4V77|1|BB|G|112

Current chains

Chain BB

5S ribosomal RNA

Nearby chains

Chain BO

50S ribosomal protein L18

Chain BW

50S ribosomal protein L27