IL_4V78_118

3D structure

PDB id

4V78 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)

Experimental method

ELECTRON MICROSCOPY

Resolution

20 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V78_118 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.3725

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

4V78|1|BA|C|1417
4V78|1|BA|G|1418
4V78|1|BA|A|1419
4V78|1|BA|A|1420
4V78|1|BA|G|1421
*
4V78|1|BA|C|1577
4V78|1|BA|U|1578
4V78|1|BA|A|1579
4V78|1|BA|A|1580
4V78|1|BA|G|1581

Current chains

Chain BA

23S ribosomal RNA

Nearby chains