IL_4V79_016

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GG*UGACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_016 not in the Motif Atlas

Homologous match to IL_6CZR_125

Geometric discrepancy: 0.3745

The information below is about IL_6CZR_125

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_99460.1

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

4V79|1|AA|G|292
4V79|1|AA|G|293
*
4V79|1|AA|U|304
4V79|1|AA|G|305
4V79|1|AA|A|306
4V79|1|AA|C|307
4V79|1|AA|C|308

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16