IL_4V79_037

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGAC*GUACA

Length

9 nucleotides

Bulged bases

4V79|1|AA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_037 not in the Motif Atlas

Geometric match to IL_5EW4_001

Geometric discrepancy: 0.3191

The information below is about IL_5EW4_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_43644.1

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

2

Unit IDs

4V79|1|AA|U|921
4V79|1|AA|G|922
4V79|1|AA|A|923
4V79|1|AA|C|924
*
4V79|1|AA|G|1392
4V79|1|AA|U|1393
4V79|1|AA|A|1394
4V79|1|AA|C|1395
4V79|1|AA|A|1396

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5