3D structure

PDB id
4V79 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
CUGAG*CGAGAUGAG
Length
14 nucleotides
Bulged bases
4V79|1|BA|G|2780
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V79_157 not in the Motif Atlas
Homologous match to IL_4WF9_099
Geometric discrepancy: 0.2636
The information below is about IL_4WF9_099
Detailed Annotation
tSH-tHS-tHW
Broad Annotation
tSH-tHS-tHW
Motif group
IL_04638.3
Basepair signature
cWW-tSH-tHW-tHS-cSH-cWW-L
Number of instances in this motif group
5

Unit IDs

4V79|1|BA|C|2636
4V79|1|BA|U|2637
4V79|1|BA|G|2638
4V79|1|BA|A|2639
4V79|1|BA|G|2640
*
4V79|1|BA|C|2774
4V79|1|BA|G|2775
4V79|1|BA|A|2776
4V79|1|BA|G|2777
4V79|1|BA|A|2778
4V79|1|BA|U|2779
4V79|1|BA|G|2780
4V79|1|BA|A|2781
4V79|1|BA|G|2782

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BJ
50S ribosomal protein L13

Coloring options:


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