3D structure

PDB id
4V79 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
UGUAAG*UUGAG
Length
11 nucleotides
Bulged bases
4V79|1|BA|G|2867
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V79_166 not in the Motif Atlas
Homologous match to IL_7A0S_101
Geometric discrepancy: 0.1408
The information below is about IL_7A0S_101
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_70411.2
Basepair signature
cWW-tSH-L-tHH-L-cWW
Number of instances in this motif group
7

Unit IDs

4V79|1|BA|U|2847
4V79|1|BA|G|2848
4V79|1|BA|U|2849
4V79|1|BA|A|2850
4V79|1|BA|A|2851
4V79|1|BA|G|2852
*
4V79|1|BA|U|2865
4V79|1|BA|U|2866
4V79|1|BA|G|2867
4V79|1|BA|A|2868
4V79|1|BA|G|2869

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BN
50S ribosomal protein L17
Chain BP
50S ribosomal protein L19

Coloring options:


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