IL_4V79_166

3D structure

PDB id

4V79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

4V79|1|BA|G|2867

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V79_166 not in the Motif Atlas

Homologous match to IL_7A0S_101

Geometric discrepancy: 0.1408

The information below is about IL_7A0S_101

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

4V79|1|BA|U|2847
4V79|1|BA|G|2848
4V79|1|BA|U|2849
4V79|1|BA|A|2850
4V79|1|BA|A|2851
4V79|1|BA|G|2852
*
4V79|1|BA|U|2865
4V79|1|BA|U|2866
4V79|1|BA|G|2867
4V79|1|BA|A|2868
4V79|1|BA|G|2869

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BP

50S ribosomal protein L19