3D structure

PDB id
4V7A (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)
Experimental method
ELECTRON MICROSCOPY
Resolution
9 Å

Loop

Sequence
GGAUAAC*GCUAAUAC
Length
15 nucleotides
Bulged bases
4V7A|1|AA|U|173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V7A_013 not in the Motif Atlas
Homologous match to IL_5J7L_012
Geometric discrepancy: 0.3044
The information below is about IL_5J7L_012
Detailed Annotation
tWH-tWH-tHW-tHW
Broad Annotation
No text annotation
Motif group
IL_80604.6
Basepair signature
cWW-cWW-tWH-tWH-tHW-tHW-cWW
Number of instances in this motif group
3

Unit IDs

4V7A|1|AA|G|147
4V7A|1|AA|G|148
4V7A|1|AA|A|149
4V7A|1|AA|U|150
4V7A|1|AA|A|151
4V7A|1|AA|A|152
4V7A|1|AA|C|153
*
4V7A|1|AA|G|168
4V7A|1|AA|C|169
4V7A|1|AA|U|170
4V7A|1|AA|A|171
4V7A|1|AA|A|172
4V7A|1|AA|U|173
4V7A|1|AA|A|174
4V7A|1|AA|C|175

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AT
30S ribosomal protein S20

Coloring options:


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