IL_4V7A_086

3D structure

PDB id

4V7A (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4)

Experimental method

ELECTRON MICROSCOPY

Resolution

9 Å

Loop

Sequence

GAAAC*GAGAUAGC

Length

13 nucleotides

Bulged bases

4V7A|1|BA|G|801, 4V7A|1|BA|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7A_086 not in the Motif Atlas

Geometric match to IL_7RQB_018

Geometric discrepancy: 0.1803

The information below is about IL_7RQB_018

Detailed Annotation

tHW-tHW cross-strand stack

Broad Annotation

No text annotation

Motif group

IL_17470.6

Basepair signature

cWW-tWW-L-R-tWH-L-cWW

Number of instances in this motif group

7

Unit IDs

4V7A|1|BA|G|674
4V7A|1|BA|A|675
4V7A|1|BA|A|676
4V7A|1|BA|A|677
4V7A|1|BA|C|678
*
4V7A|1|BA|G|799
4V7A|1|BA|A|800
4V7A|1|BA|G|801
4V7A|1|BA|A|802
4V7A|1|BA|U|803
4V7A|1|BA|A|804
4V7A|1|BA|G|805
4V7A|1|BA|C|806

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15