IL_4V7B_030

3D structure

PDB id

4V7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

GAU*AUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GAU,AUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7B_030 not in the Motif Atlas

Geometric match to IL_3LA5_001

Geometric discrepancy: 0.1031

The information below is about IL_3LA5_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

4V7B|1|AA|G|601
4V7B|1|AA|A|602
4V7B|1|AA|U|603
*
4V7B|1|AA|A|635
4V7B|1|AA|U|636
4V7B|1|AA|C|637

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AH

30S ribosomal protein S8

Chain AQ

30S ribosomal protein S17