IL_4V7B_092

3D structure

PDB id

4V7B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Visualization of two tRNAs trapped in transit during EF-G-mediated translocation

Experimental method

ELECTRON MICROSCOPY

Resolution

6.8 Å

Loop

Sequence

AAUU*AU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7B_092 not in the Motif Atlas

Geometric match to IL_5J7L_267

Geometric discrepancy: 0.179

The information below is about IL_5J7L_267

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4V7B|1|BA|A|844
4V7B|1|BA|A|845
4V7B|1|BA|U|846
4V7B|1|BA|U|847
*
4V7B|1|BA|A|933
4V7B|1|BA|U|934

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BZ

50S ribosomal protein L30